Basic Information
Locus ID:
gene-LOC107027768
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
CRK1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 58763787 | 58765351 | + | gene-LOC107027768 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 15,978.99 Da | 30.59 | 102.18 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 8 | 128 | 3.4E-33 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 126 | 2.56E-36 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 51 | 136 | 1.4E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 50 | 8.2E-14 | - |
| SMART | SM00220 | serkin_6 | 3 | 141 | 1.1E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 142 | 25.545097 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 86 | 98 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_015084321.1 | CDPK-related kinase 1-like [Solanum pennellii] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011937m.g.v1.0, Thhalv10023098m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0190_0010.v2.2 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G04062 |
| Poaceae | Zea mays | 2 | Zm00001eb085930_P001, Zm00001eb233750_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-32968, nbis-gene-57804 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107027768, gene-LOC114075599 |