Basic Information
Locus ID:
gene-LOC107027672
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 48706467 | 48716058 | - | gene-LOC107027672 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 43,626.65 Da | 45.20 | 95.95 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 140 | 341 | 6.44358E-52 | IPR001220 |
| Pfam | PF05699 | hAT family C-terminal dimerisation region | 58 | 114 | 3.6E-12 | IPR008906 |
| Pfam | PF00139 | Legume lectin domain | 139 | 340 | 3.5E-39 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 139 | 339 | 1.26E-45 | IPR013320 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 44 | 119 | 4.93E-10 | IPR012337 |
| Gene3D | G3DSA:2.60.120.200 | - | 122 | 354 | 2.1E-55 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_027775098.1 | lectin-related protein-like [Solanum pennellii] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | M1DCI9 | Protein kinase domain-containing protein OS=Solanum tuberosum OX=4113 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg36599, jg36601 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17867 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah034687, Ah034688, Ah034689 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g030170 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21591, Sbi_jg22231 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg16156, Seu_jg16157, Seu_jg16158 |
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00008756, GOSA_00008758, GOSA_00008759, GOSA_00008760 |
| Amaranthaceae | Suaeda glauca | 9 | Sgl62700, Sgl62701, Sgl62702, Sgl62703, Sgl67262, Sgl67321 ... |
| Amaranthaceae | Chenopodium album | 7 | gene:ENSEOMG00000017184, gene:ENSEOMG00000019633 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.1BG0021020, CQ.Regalona.r1.2AG0022820 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30249920 |
| Apiaceae | Apium graveolens | 1 | Ag4G01692 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G2332 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2537 |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG04.3036, evm.TU.LG04.3038, evm.TU.LG16.568 ... |
| Salicaceae | Populus euphratica | 2 | populus_peu04773, populus_peu04774 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107027672, gene-LOC114073871 |
| Tamaricaceae | Reaumuria soongarica | 4 | STRG.32911_chr09_-, STRG.32912_chr09_-, gene_17258 ... |
| Tamaricaceae | Tamarix chinensis | 5 | TC01G1529, TC01G1531, TC02G0491, TC02G0493, TC02G0500 |