Basic Information
Locus ID:
gene-LOC107027487
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
BTB POZ domain-containing protein POB1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 96925807 | 96930674 | + | gene-LOC107027487 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 63,554.08 Da | 54.80 | 74.13 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 150 | 228 | 8.02379E-14 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 268 | 361 | 2.7E-10 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 154 | 242 | 9.3E-14 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 155 | 242 | 9.42E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 444 | 555 | 4.9E-8 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 431 | 556 | 1.2E-5 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 279 | 383 | 2.5E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 141 | 278 | 1.3E-17 | IPR011333 |
| SMART | SM00225 | BTB_4 | 147 | 245 | 9.3E-9 | IPR000210 |
| SMART | SM00875 | BACK_2 | 260 | 362 | 9.7E-8 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 145 | 214 | 13.467028 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_027772219.1 | BTB/POZ domain-containing protein POB1-like isoform X1 [Solanum pennellii] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2BFI2 | BTB domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_012539 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology