Basic Information
Locus ID:
gene-LOC107027416
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 3238849 | 3246907 | + | gene-LOC107027416 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 51,860.99 Da | 43.93 | 81.62 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 17 | 184 | 9.0E-49 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 277 | 321 | 1.4E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 276 | 342 | 5.23E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 264 | 338 | 7.7E-16 | IPR036638 |
| SMART | SM00353 | finulus | 278 | 327 | 3.4E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 272 | 321 | 16.462729 | IPR011598 |
| Coils | Coil | Coil | 311 | 338 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46760.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_015084073.2 | transcription factor bHLH14-like [Solanum pennellii] | 0 |
| Q9FIP9 | Transcription factor MYC3 OS=Arabidopsis thaliana OX=3702 GN=MYC3 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology