Basic Information
Locus ID:
gene-LOC107027354
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 63283391 | 63285056 | - | gene-LOC107027354 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 51,980.94 Da | 32.62 | 88.72 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 102 | 465 | 4.32503E-74 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 102 | 282 | 9.9E-55 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 310 | 460 | 1.2E-23 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 98 | 465 | 8.92E-90 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 281 | 468 | 1.7E-43 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 77 | 280 | 3.1E-56 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 102 | 461 | 42.668503 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 346 | 357 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 117 | 128 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 108 | 128 | 4.5E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 346 | 357 | 4.5E-5 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_015084016.1 | aspartic proteinase CDR1-like [Solanum pennellii] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology