Basic Information
Locus ID:
gene-LOC107026803
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 4904783 | 4909969 | - | gene-LOC107026803 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 45,380.39 Da | 49.36 | 92.58 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 194 | 254 | 1.12876E-5 | - |
| Pfam | PF02135 | TAZ zinc finger | 276 | 361 | 6.7E-12 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 84 | 190 | 6.0E-10 | IPR000210 |
| SUPERFAMILY | SSF57933 | TAZ domain | 268 | 365 | 1.05E-21 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 81 | 190 | 4.87E-15 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 269 | 390 | 3.2E-22 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 77 | 191 | 1.0E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 193 | 268 | 1.7E-13 | - |
| SMART | SM00551 | TAZ_2 | 269 | 362 | 7.0E-34 | IPR000197 |
| SMART | SM00225 | BTB_4 | 92 | 192 | 6.3E-7 | IPR000210 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 266 | 364 | 9.059887 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 92 | 160 | 9.806314 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05690.1 | BTB and TAZ domain protein 3. BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development. | 0 |
| RefSeq | XP_015083377.1 | BTB/POZ and TAZ domain-containing protein 3 [Solanum pennellii] | 0 |
| Q9SYL0 | BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BT3 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology