Basic Information
Locus ID:
gene-LOC107026727
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 2784927 | 2787603 | - | gene-LOC107026727 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 51,864.97 Da | 38.17 | 80.40 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 29 | 104 | 4.56394E-16 | - |
| Pfam | PF02214 | BTB/POZ domain | 29 | 112 | 2.4E-11 | IPR003131 |
| SUPERFAMILY | SSF69322 | Tricorn protease domain 2 | 122 | 407 | 3.66E-14 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 26 | 112 | 1.69E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 10 | 118 | 6.9E-18 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 184 | 468 | 7.9E-8 | IPR015943 |
| SMART | SM00225 | BTB_4 | 27 | 121 | 4.3E-9 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_015083289.1 | BTB/POZ domain-containing protein At5g41330-like [Solanum pennellii] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology