Basic Information
Locus ID:
gene-LOC107026685
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 63141733 | 63149118 | - | gene-LOC107026685 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 40,514.02 Da | 50.12 | 78.92 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 297 | 343 | 2.9E-11 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 281 | 348 | 9.71E-17 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 43 | 252 | 4.19E-24 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 256 | 1.5E-11 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 276 | 360 | 1.4E-17 | - |
| SMART | SM00326 | SH3_2 | 293 | 348 | 1.8E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 290 | 349 | 21.239607 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 276 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_015083237.1 | SH3 domain-containing protein 1-like isoform X1 [Solanum pennellii] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology