halophFGD

Basic Information

Locus ID: gene-LOC107026181

Species & Taxonomic ID: Solanum pennellii & 28526

Genome Assembly: GCF_001406875.1

Description: F-Box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	4719884	4721560	+	gene-LOC107026181

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.19	44,680.61 Da	46.53	88.35	-0.24

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	14	53	1.2E-5	IPR001810
Pfam	PF08268	F-box associated domain	219	326	6.2E-8	IPR013187
SUPERFAMILY	SSF81383	F-box domain	11	74	4.84E-11	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	8	54	5.1E-6	-
SMART	SM00256	fbox_2	15	55	2.9E-4	IPR001810
TIGRFAM	TIGR01640	F_box_assoc_1: F-box protein interaction domain	129	326	3.1E-15	IPR017451
ProSiteProfiles	PS50181	F-box domain profile.	9	54	11.511044	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G33020.1	F-box and associated interaction domains-containing protein.	0
RefSeq	XP_015082544.2	putative F-box protein At4g38870 [Solanum pennellii]	0
Swiss-Prot	Q9MAP1	Putative F-box protein At1g33020 OS=Arabidopsis thaliana OX=3702 GN=At1g33020 PE=4 SV=2	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Solanaceae	Lycium barbarum	3	gene-LOC132619443, gene-LOC132619444, gene-LOC132628912
Solanaceae	Solanum chilense	3	SOLCI001075800, SOLCI004757200, SOLCI004757300
Solanaceae	Solanum pennellii	3	gene-LOC107019849, gene-LOC107025258, gene-LOC107026181