Basic Information
Locus ID:
gene-LOC107025983
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 3273032 | 3276566 | - | gene-LOC107025983 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 68,338.22 Da | 41.80 | 105.27 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 238 | 261 | 0.0058 | IPR001611 |
| Pfam | PF00646 | F-box domain | 59 | 99 | 1.8E-4 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 558 | 578 | 0.051 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 476 | 498 | 0.2 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 213 | 236 | 0.0072 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 178 | 639 | 6.67E-36 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 173 | 415 | 2.31E-37 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 54 | 97 | 1.7E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 503 | 637 | 3.0E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 133 | 251 | 9.0E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 441 | 502 | 1.8E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 252 | 440 | 1.2E-33 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 265 | 290 | 4.3E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 450 | 475 | 5.3 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 582 | 610 | 64.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 476 | 501 | 0.0051 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 371 | 396 | 0.19 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 530 | 555 | 0.079 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 503 | 528 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 187 | 212 | 0.028 | IPR006553 |
| SMART | SM00256 | fbox_2 | 63 | 104 | 1.1E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 556 | 580 | 0.0026 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 397 | 422 | 77.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 239 | 264 | 1.6E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 213 | 238 | 2.1E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 345 | 370 | 30.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_015082287.1 | EIN3-binding F-box protein 1-like [Solanum pennellii] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology