Basic Information
Locus ID:
gene-LOC107025504
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 73219687 | 73223560 | - | gene-LOC107025504 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 108,376.87 Da | 31.70 | 98.26 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 684 | 958 | 8.3E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 60 | 5.9E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 235 | 295 | 1.8E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 91 | 149 | 9.7E-11 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 960 | 1.28E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 71 | 375 | 2.51E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 308 | 605 | 1.22E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 975 | 2.0E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 258 | 2.8E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 614 | 5.1E-83 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 766 | 2.7E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 200 | 3.4E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 259 | 329 | 1.9E-16 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 521 | 545 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 282 | 306 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 566 | 591 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 137 | 320.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 681 | 964 | 1.3E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 473 | 497 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 210 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 89 | 113 | 2.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 10.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 681 | 964 | 39.170273 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 687 | 710 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_015081779.1 | receptor-like protein kinase HSL1 [Solanum pennellii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology