halophFGD

Basic Information

Locus ID: gene-LOC107025397

Species & Taxonomic ID: Solanum pennellii & 28526

Genome Assembly: GCF_001406875.1

Description: VQ motif

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	67384897	67385816	-	gene-LOC107025397

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.52	20,539.29 Da	63.33	41.62	-0.88

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF05678	VQ motif	75	98	2.0E-10	IPR008889
MobiDBLite	mobidb-lite	consensus disorder prediction	40	76	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT3G22160.1	VQ motif-containing protein.
RefSeq	XP_015081673.1	VQ motif-containing protein 22-like [Solanum pennellii]
Swiss-Prot	Q9LIE6	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	11	jg10829, jg17022, jg19028, jg20928, jg20929, jg21106, jg6118 ... jg22632, jg31134, jg37473, jg39502
Aizoaceae	Mesembryanthemum crystallinum	4	gene_23314, gene_23709, gene_25087, gene_6189
Amaranthaceae	Atriplex hortensis	4	Ah021725, Ah023946, Ah027043, Ah027320
Amaranthaceae	Beta vulgaris	4	BVRB_1g009390, BVRB_3g061210, BVRB_6g132260, BVRB_6g135250
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg12701, Sbi_jg13508, Sbi_jg19477, Sbi_jg29281 ... Sbi_jg31307, Sbi_jg52379, Sbi_jg53207
Amaranthaceae	Salicornia europaea	4	Seu_jg25596, Seu_jg6442, Seu_jg8690, Seu_jg9475
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00010321, GOSA_00022260
Amaranthaceae	Suaeda glauca	10	Sgl11760, Sgl11922, Sgl17249, Sgl33467, Sgl33503, Sgl33561 ... Sgl38851, Sgl39103, Sgl71840, Sgl75401
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000000297, gene:ENSEOMG00000001281 ... gene:ENSEOMG00000001977, gene:ENSEOMG00000012991, gene:ENSEOMG00000024736, gene:ENSEOMG00000025794, gene:ENSEOMG00000030415, gene:ENSEOMG00000033896, gene:ENSEOMG00000049817
Amaranthaceae	Chenopodium quinoa	8	CQ.Regalona.r1.1AG0011930, CQ.Regalona.r1.1BG0013970 ... CQ.Regalona.r1.3AG0020620, CQ.Regalona.r1.3BG0021440, CQ.Regalona.r1.6AG0021680, CQ.Regalona.r1.6AG0024160, CQ.Regalona.r1.6BG0022880, CQ.Regalona.r1.6BG0025500
Anacardiaceae	Pistacia vera	1	pistato.v30197330
Apiaceae	Apium graveolens	7	Ag11G03407, Ag3G01703, Ag4G02732, Ag7G00471, Ag7G02438 ... Ag9G02517, AgUnG00088
Arecaceae	Cocos nucifera	6	COCNU_03G006800, COCNU_13G002930, contig69545365G000010 ... scaffold001054G000070, scaffold001054G000080, scaffold018973G000050
Arecaceae	Phoenix dactylifera	7	gene-LOC103699546, gene-LOC103701748, gene-LOC103711263 ... gene-LOC103714971, gene-LOC103720247, gene-LOC103721073, gene-LOC120107366
Asparagaceae	Asparagus officinalis	1	AsparagusV1_06.131.V1.1
Asteraceae	Flaveria trinervia	7	Ftri13G24412, Ftri14G34012, Ftri16G06113, Ftri18G07277 ... Ftri18G18234, Ftri1G27924, Ftri2G06114
Brassicaceae	Arabidopsis thaliana	5	AT1G35830.1, AT3G22160.1, AT4G15120.1, AT4G39720.1 ... AT5G65170.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10001873m.g.v1.0, Thhalv10004427m.g.v1.0 ... Thhalv10021568m.g.v1.0, Thhalv10025887m.g.v1.0, Thhalv10026342m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g30500.v2.2, Sp2g28260.v2.2, Sp3g19970.v2.2 ... Sp7g13350.v2.2, Sp7g36170.v2.2
Brassicaceae	Brassica nigra	9	BniB01g040600.2N, BniB03g015000.2N, BniB04g000960.2N ... BniB05g000310.2N, BniB05g021040.2N, BniB06g013480.2N, BniB07g032240.2N, BniB07g043160.2N, BniB07g049480.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq04G1367, Ceq04G1368
Casuarinaceae	Casuarina glauca	1	Cgl04G1529
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g02750, gene.Cymno09g04870, gene.Cymno11g06700 ... gene.Cymno13g03610
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate04g00360, gene.Thate05g28250, gene.Thate07g04500
Malvaceae	Hibiscus hamabo Siebold & Zucc.	4	nbisL1-mrna-10166, nbisL1-mrna-1816, nbisL1-mrna-3061 ... nbisL1-mrna-8357
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG01.1612, evm.TU.LG02.672, evm.TU.LG06.1032 ... evm.TU.LG12.362
Plantaginaceae	Plantago ovata	8	Pov_00003740, Pov_00005197, Pov_00012912, Pov_00014536 ... Pov_00020961, Pov_00031709, Pov_00034554, Pov_00037289
Plumbaginaceae	Limonium bicolor	2	Lb5G27783, Lb5G27858
Poaceae	Echinochloa crus-galli	18	AH01.3439, AH03.1726, AH03.3753, AH06.2600, AH07.518 ... AH08.1333, BH01.3793, BH03.1889, BH03.4032, BH07.1639, BH07.644, BH08.1532, CH01.4046, CH03.2064, CH03.4303, CH06.2686, CH07.522, CH08.1594
Poaceae	Eleusine coracana subsp. coracana	11	gene-QOZ80_2AG0103110, gene-QOZ80_2BG0156420 ... gene-QOZ80_3BG0277680, gene-QOZ80_6AG0533610, gene-QOZ80_6AG0547570, gene-QOZ80_6BG0486660, gene-QOZ80_6BG0501200, gene-QOZ80_7AG0577940, gene-QOZ80_7BG0609260, gene-QOZ80_8AG0629620, gene-QOZ80_8BG0658420
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.3HG0222180.1.CDS1 ... HORVU.MOREX.r3.5HG0476460.1.CDS1, HORVU.MOREX.r3.6HG0571070.1.CDS1, HORVU.MOREX.r3.7HG0738010.1.CDS1
Poaceae	Lolium multiflorum	6	gene-QYE76_004823, gene-QYE76_020816, gene-QYE76_036290 ... gene-QYE76_036303, gene-QYE76_039531, gene-QYE76_067559
Poaceae	Oryza coarctata	11	Oco03G003570, Oco04G003520, Oco05G014940, Oco06G015330 ... Oco11G014850, Oco12G014950, Oco14G013860, Oco15G007980, Oco16G007710, Oco17G003520, Oco18G003530
Poaceae	Oryza sativa	6	LOC_Os02g07690.1, LOC_Os03g26990.1, LOC_Os06g45570.1 ... LOC_Os07g43140.1, LOC_Os08g31660.1, LOC_Os09g20460.1
Poaceae	Paspalum vaginatum	6	gene-BS78_01G330600, gene-BS78_02G166600 ... gene-BS78_02G356400, gene-BS78_04G053700, gene-BS78_07G130500, gene-BS78_10G220000
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0702410
Poaceae	Sporobolus alterniflorus	18	Chr02G031560, Chr04G012590, Chr05G009400, Chr06G034310 ... Chr07G011990, Chr10G011260, Chr10G019870, Chr11G002770, Chr11G011020, Chr14G012950, Chr15G025570, Chr16G013830, Chr17G013270, Chr19G001900, Chr20G006510, Chr21G012030, Chr27G015300, Chr29G006160
Poaceae	Thinopyrum elongatum	3	Tel3E01G072000, Tel5E01G327300, Tel6E01G319700
Poaceae	Triticum dicoccoides	6	gene_TRIDC2BG078030, gene_TRIDC5AG031560 ... gene_TRIDC5BG033260, gene_TRIDC6AG021870, gene_TRIDC6BG027640, gene_TRIDC7BG060600
Poaceae	Triticum aestivum	11	TraesCS3A02G044200.1.cds1, TraesCS3D02G036600.1 ... TraesCS5A02G189700.1.cds1, TraesCS5B02G193500.1.cds1, TraesCS5D02G201200.1.cds1, TraesCS6A02G156200.1.cds1, TraesCS6B02G184400.1.cds1, TraesCS6D02G146200.1.cds1, TraesCS7A02G478700.1.cds1, TraesCS7B02G381400.1.cds1, TraesCS7D02G466100.1.cds1
Poaceae	Zea mays	9	Zm00001eb084880_P001, Zm00001eb098700_P001 ... Zm00001eb178900_P001, Zm00001eb233250_P001, Zm00001eb274360_P001, Zm00001eb311250_P001, Zm00001eb327890_P001, Zm00001eb389870_P001, Zm00001eb392380_P001
Poaceae	Zoysia japonica	12	nbis-gene-11999, nbis-gene-16904, nbis-gene-19915 ... nbis-gene-29855, nbis-gene-30989, nbis-gene-327, nbis-gene-33641, nbis-gene-40519, nbis-gene-45028, nbis-gene-52172, nbis-gene-55130, nbis-gene-9800
Poaceae	Zoysia macrostachya	10	Zma_g1095, Zma_g12265, Zma_g15023, Zma_g22966, Zma_g24050 ... Zma_g30965, Zma_g32498, Zma_g33225, Zma_g3524, Zma_g6890
Portulacaceae	Portulaca oleracea	7	evm.TU.LG01.239, evm.TU.LG05.653, evm.TU.LG06.672 ... evm.TU.LG11.111, evm.TU.LG18.414, evm.TU.LG25.666, evm.TU.LG26.622
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g29360, gene.Posoc04g15220, gene.Posoc10g08670
Rhizophoraceae	Bruguiera sexangula	8	evm.TU.Scaffold_10_RagTag.1015, evm.TU.Scaffold_8_RagTag.282 ... evm.TU.Scaffold_3_RagTag.1053, evm.TU.Scaffold_4_RagTag.1512, evm.TU.Scaffold_6_RagTag.1648, evm.TU.Scaffold_7_RagTag.1006, evm.TU.Scaffold_7_RagTag.1513, evm.TU.Scaffold_8_RagTag.724
Rhizophoraceae	Carallia pectinifolia	9	nbisL1-mrna-10012, nbisL1-mrna-13476, nbisL1-mrna-17521 ... nbisL1-mrna-18840, nbisL1-mrna-19974, nbisL1-mrna-20323, nbisL1-mrna-26232, nbisL1-mrna-945, nbisL1-mrna-9517
Rhizophoraceae	Ceriops tagal	8	nbisL1-mrna-1023, nbisL1-mrna-13585, nbisL1-mrna-14975 ... nbisL1-mrna-158, nbisL1-mrna-16161, nbisL1-mrna-16497, nbisL1-mrna-17598, nbisL1-mrna-1977
Rhizophoraceae	Ceriops zippeliana	8	nbisL1-mrna-12118, nbisL1-mrna-13447, nbisL1-mrna-17905 ... nbisL1-mrna-18271, nbisL1-mrna-2322, nbisL1-mrna-4342, nbisL1-mrna-6831, nbisL1-mrna-9249
Rhizophoraceae	Kandelia candel	8	add.evm.TU.utg000002l.298, add.evm.TU.utg000002l.65 ... add.evm.TU.utg000004l.98, add.evm.TU.utg000008l.321, add.evm.TU.utg000011l.396, add.evm.TU.utg000018l.204, add.evm.TU.utg000018l.323, add.evm.TU.utg000019l.267
Rhizophoraceae	Kandelia obovata	6	Maker00000310, Maker00001886, Maker00003127, Maker00003706 ... Maker00008110, Maker00010528
Rhizophoraceae	Rhizophora apiculata	8	nbisL1-mrna-15113, nbisL1-mrna-17583, nbisL1-mrna-17893 ... nbisL1-mrna-17994, nbisL1-mrna-18219, nbisL1-mrna-19200, nbisL1-mrna-20026, nbisL1-mrna-22773
Rhizophoraceae	Rhizophora mangle	7	nbisL1-mrna-11327, nbisL1-mrna-12199, nbisL1-mrna-1747 ... nbisL1-mrna-20332, nbisL1-mrna-4425, nbisL1-mrna-7690, nbisL1-mrna-9936
Salicaceae	Populus euphratica	10	populus_peu02993, populus_peu10447, populus_peu10531 ... populus_peu13782, populus_peu14624, populus_peu22941, populus_peu26432, populus_peu32292, populus_peu33869, populus_peu37340
Solanaceae	Lycium barbarum	5	gene-LOC132601814, gene-LOC132614646, gene-LOC132618583 ... gene-LOC132624429, gene-LOC132627493
Solanaceae	Solanum chilense	5	SOLCI001049900, SOLCI001788000, SOLCI002873100 ... SOLCI004375100, SOLCI005066000
Solanaceae	Solanum pennellii	5	gene-LOC107006034, gene-LOC107009869, gene-LOC107016098 ... gene-LOC107016346, gene-LOC107025397
Tamaricaceae	Reaumuria soongarica	3	STRG.16610_chr06_+, STRG.22171_chr09_-, STRG.6002_chr02_-
Tamaricaceae	Tamarix chinensis	3	TC03G2772, TC07G1973, TC09G0014
Zosteraceae	Zostera marina	3	Zosma03g22450.v3.1, Zosma03g33850.v3.1, Zosma05g20080.v3.1