Basic Information
Locus ID:
gene-LOC107025340
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
CERK1
Description:
Chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 70818537 | 70830413 | - | gene-LOC107025340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 69,557.97 Da | 34.63 | 91.26 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 333 | 600 | 1.1E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 308 | 601 | 2.16E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 306 | 401 | 1.6E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 402 | 612 | 4.0E-55 | - |
| SMART | SM00220 | serkin_6 | 331 | 603 | 7.6E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 331 | 604 | 38.915863 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 337 | 359 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 446 | 458 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_015081610.1 | chitin elicitor receptor kinase 1-like isoform X1 [Solanum pennellii] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology