Basic Information
Locus ID:
gene-LOC107025325
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 98019853 | 98022982 | - | gene-LOC107025325 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 68,172.98 Da | 42.45 | 77.93 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 254 | 514 | 3.2E-51 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 235 | 518 | 8.5E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 327 | 541 | 1.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 224 | 325 | 3.7E-34 | - |
| SMART | SM00219 | tyrkin_6 | 250 | 515 | 1.4E-35 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 250 | 519 | 39.156139 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 367 | 379 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 588 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55200.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_027769910.1 | probable serine/threonine-protein kinase PBL6 [Solanum pennellii] | 0 |
| Q1PEM5 | Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana OX=3702 GN=PERK3 PE=2 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg1471 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30168650 |
| Apiaceae | Apium graveolens | 4 | Ag10G02206, Ag11G04546, Ag2G00801, Ag9G01854 |
| Arecaceae | Cocos nucifera | 1 | scaffold000460G000040 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103697818 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_Unassigned.288.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri15G18457, Ftri17G12801, Ftri6G19474 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G0955 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0954 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000158 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_18_RagTag.210 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-28373, nbisL1-mrna-7221 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13228 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-7688, nbisL1-mrna-7689, nbisL1-mrna-7690 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000023l.272 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018787 |
| Salicaceae | Populus euphratica | 2 | populus_peu04171, populus_peu12000 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132644359 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107025325 |