Basic Information
Locus ID:
gene-LOC107025266
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 74180693 | 74182616 | + | gene-LOC107025266 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 56,768.39 Da | 38.09 | 108.00 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 142 | 398 | 1.26E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 54 | 2.35E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 91 | 445 | 3.6E-10 | IPR032675 |
| SMART | SM00256 | fbox_2 | 14 | 54 | 1.8E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 8 | 55 | 8.59666 | IPR001810 |
| Coils | Coil | Coil | 410 | 430 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69630.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_015081546.1 | F-box/FBD/LRR-repeat protein At5g53840-like [Solanum pennellii] | 0 |
| Q9FWZ1 | F-box/LRR-repeat protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBL13 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 6 | gene-LOC132612692, gene-LOC132617794, gene-LOC132619153 ... |
| Solanaceae | Solanum chilense | 2 | SOLCI002523600, SOLCI002523700 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107025266, gene-LOC107025267, gene-LOC107025498 |