Basic Information
Locus ID:
gene-LOC107024650
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
PRK1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 6592642 | 6596007 | + | gene-LOC107024650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 71,857.48 Da | 42.99 | 89.12 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 133 | 186 | 4.0E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 351 | 618 | 2.1E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 620 | 5.33E-45 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 197 | 3.06E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 318 | 422 | 4.7E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 219 | 1.8E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 423 | 643 | 6.1E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 624 | 25.036274 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 353 | 375 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 319 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015081130.1 | pollen receptor-like kinase 4 [Solanum pennellii] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology