Basic Information
Locus ID:
gene-LOC107024290
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 75045361 | 75051628 | - | gene-LOC107024290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 49,323.11 Da | 37.91 | 110.04 | 0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 104 | 260 | 4.6E-23 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 295 | 434 | 1.2E-16 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 280 | 438 | 3.3E-18 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 134 | 276 | 3.9E-16 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 71 | 437 | 2.4E-118 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 89 | 437 | 4.9E-100 | IPR004798 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_015080727.1 | vacuolar cation/proton exchanger 3-like [Solanum pennellii] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology