Basic Information
Locus ID:
gene-LOC107024263
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
zinc ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 72720794 | 72722566 | - | gene-LOC107024263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 26,929.02 Da | 64.10 | 69.75 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 73 | 120 | 7.42458E-11 | - |
| Pfam | PF12906 | RING-variant domain | 73 | 119 | 1.1E-10 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 68 | 122 | 5.3E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 57 | 131 | 1.8E-14 | IPR013083 |
| SMART | SM00744 | ringv_2 | 72 | 120 | 4.6E-16 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 65 | 126 | 20.185003 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 40 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59000.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_015080695.2 | uncharacterized protein LOC107024263 [Solanum pennellii] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology