Basic Information
Locus ID:
gene-LOC107024176
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 67079461 | 67081197 | - | gene-LOC107024176 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 43,859.11 Da | 37.26 | 105.81 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 125 | 184 | 5.9E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 66 | 6.8E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 350 | 5.1E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 190 | 3.1E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 387 | 2.7E-27 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 9.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 171 | 0.62 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 149 | 171 | 7.450131 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 236 | 249 | 3.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 195 | 208 | 3.1E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_015080575.1 | receptor protein-tyrosine kinase CEPR1 [Solanum pennellii] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology