Basic Information
Locus ID:
gene-LOC107023757
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Zc3h12a-like Ribonuclease NYN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 56861722 | 56868118 | - | gene-LOC107023757 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 61,597.84 Da | 42.77 | 75.61 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 5 | 212 | 1.1E-70 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 255 | 479 | 7.5E-63 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 271 | 446 | 1.9E-216 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 13 | 480 | 1.9E-216 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 125 | 159 | 8.637562 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 551 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_015080035.1 | proteinaceous RNase P 2-like [Solanum pennellii] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology