Basic Information
Locus ID:
gene-LOC107023162
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 51611807 | 51621471 | + | gene-LOC107023162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 174,310.59 Da | 45.02 | 76.58 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 166 | 430 | 1.14259E-91 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1246 | 1505 | 3.76314E-128 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1450 | 1503 | 1.6E-8 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1284 | 1448 | 8.7E-35 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 171 | 427 | 9.1E-22 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1235 | 1505 | 2.16E-79 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 229 | 397 | 2.88E-24 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1369 | 1506 | 2.4E-40 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 228 | 397 | 1.7E-31 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1209 | 1364 | 2.6E-35 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1221 | 1506 | 6.3E-88 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1186 | 1505 | 57.658436 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1529 | 1559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1538 | 1559 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_015079237.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Solanum pennellii] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology