Basic Information
Locus ID:
gene-LOC107023113
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 51732058 | 51743313 | - | gene-LOC107023113 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 102,355.23 Da | 57.27 | 62.30 | -1.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 43 | 247 | 2.11E-9 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 677 | 718 | 5.79E-6 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 670 | 726 | 2.4E-10 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 17 | 286 | 1.9E-5 | IPR011989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 568 | 584 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 941 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 918 | 934 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 802 | 820 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 643 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 615 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 903 | 917 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 833 | 888 | - | - |
| Coils | Coil | Coil | 26 | 46 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_015079158.1 | muscle M-line assembly protein unc-89 [Solanum pennellii] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology