halophFGD

Basic Information

Locus ID: gene-LOC107022782

Species & Taxonomic ID: Solanum pennellii & 28526

Genome Assembly: GCF_001406875.1

Short Name: IAA19

Description: Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6	52483713	52485804	+	gene-LOC107022782

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.69	21,123.78 Da	48.76	75.24	-0.58

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02309	AUX/IAA family	33	114	1.3E-21	IPR033389
Pfam	PF02309	AUX/IAA family	117	164	1.2E-24	IPR033389
SUPERFAMILY	SSF54277	CAD & PB1 domains	67	157	2.84E-21	-
Gene3D	G3DSA:3.10.20.90	-	72	169	3.2E-35	-
ProSiteProfiles	PS51745	PB1 domain profile.	77	160	20.735218	IPR000270

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K14484 (auxin-responsive protein IAA)

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G15540.1	indole-3-acetic acid inducible 19. Primary auxin-responsive gene. Involved in the regulation stamen filaments development.
RefSeq	XP_015078857.1	auxin-induced protein AUX22-like [Solanum pennellii]
Swiss-Prot	P13088	Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg11125, jg12643, jg16163, jg25380, jg27188, jg27189, jg8735 ... jg27828, jg37840
Aizoaceae	Mesembryanthemum crystallinum	4	gene_11693, gene_11694, gene_19350, gene_26163
Amaranthaceae	Atriplex hortensis	6	Ah000273, Ah006132, Ah006133, Ah006134, Ah010684, Ah010685
Amaranthaceae	Beta vulgaris	4	BVRB_4g082270, BVRB_5g104590, BVRB_5g120300, BVRB_9g220390
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg11485, Sbi_jg16803, Sbi_jg16806, Sbi_jg31556 ... Sbi_jg46415, Sbi_jg57727, Sbi_jg61322, Sbi_jg61324
Amaranthaceae	Salicornia europaea	4	Seu_jg20736, Seu_jg23054, Seu_jg23055, Seu_jg25375
Amaranthaceae	Suaeda aralocaspica	9	GOSA_00005253, GOSA_00008206, GOSA_00008207, GOSA_00008208 ... GOSA_00008209, GOSA_00019481, GOSA_00024682, GOSA_00025843, GOSA_00029228
Amaranthaceae	Suaeda glauca	9	Sgl24838, Sgl24839, Sgl29984, Sgl29985, Sgl54306, Sgl55869 ... Sgl55997, Sgl59650, Sgl61178
Amaranthaceae	Chenopodium album	15	gene:ENSEOMG00000006929, gene:ENSEOMG00000009766 ... gene:ENSEOMG00000010841, gene:ENSEOMG00000011203, gene:ENSEOMG00000019579, gene:ENSEOMG00000020345, gene:ENSEOMG00000026475, gene:ENSEOMG00000028992, gene:ENSEOMG00000029568, gene:ENSEOMG00000029994, gene:ENSEOMG00000038759, gene:ENSEOMG00000041166, gene:ENSEOMG00000042597, gene:ENSEOMG00000042845, gene:ENSEOMG00000052906
Amaranthaceae	Chenopodium quinoa	10	CQ.Regalona.r1.4AG0010590, CQ.Regalona.r1.4AG0010600 ... CQ.Regalona.r1.4AG0010610, CQ.Regalona.r1.4BG0010810, CQ.Regalona.r1.4BG0010820, CQ.Regalona.r1.4BG0010830, CQ.Regalona.r1.5AG0025610, CQ.Regalona.r1.5BG0027130, CQ.Regalona.r1.7BG0010690, CQ.Regalona.r1.9AG0013920
Anacardiaceae	Pistacia vera	6	pistato.v30026350, pistato.v30126970, pistato.v30126980 ... pistato.v30184400, pistato.v30235720, pistato.v30255980
Apiaceae	Apium graveolens	10	Ag10G00703, Ag1G01813, Ag2G02344, Ag4G00136, Ag4G00137 ... Ag5G02561, Ag8G01540, Ag9G01154, Ag9G01736, Ag9G02083
Arecaceae	Cocos nucifera	4	COCNU_02G000230, COCNU_03G001800, COCNU_06G015050 ... COCNU_14G011800
Arecaceae	Phoenix dactylifera	5	gene-LOC103704407, gene-LOC103704533, gene-LOC103705981 ... gene-LOC103720508, gene-LOC103721010
Asparagaceae	Asparagus officinalis	7	AsparagusV1_03.3028.V1.1, AsparagusV1_03.582.V1.1 ... AsparagusV1_06.1943.V1.1, AsparagusV1_07.2576.V1.1, AsparagusV1_07.3197.V1.1, AsparagusV1_08.2042.V1.1, AsparagusV1_08.642.V1.1
Asteraceae	Flaveria trinervia	12	Ftri10G02327, Ftri12G12220, Ftri15G05652, Ftri18G06468 ... Ftri18G08799, Ftri18G22483, Ftri1G01589, Ftri1G24079, Ftri8G09746, Ftri8G31056, Ftri9G13988, Ftri9G15987
Brassicaceae	Arabidopsis thaliana	8	AT1G04240.1, AT1G15580.1, AT1G52830.1, AT1G80390.1 ... AT3G15540.1, AT3G23030.1, AT4G14560.1, AT5G43700.1
Brassicaceae	Eutrema salsugineum	7	Thhalv10003276m.g.v1.0, Thhalv10008636m.g.v1.0 ... Thhalv10012354m.g.v1.0, Thhalv10019723m.g.v1.0, Thhalv10021556m.g.v1.0, Thhalv10021641m.g.v1.0, Thhalv10026385m.g.v1.0
Brassicaceae	Schrenkiella parvula	8	Sp1g03050.v2.2, Sp1g13950.v2.2, Sp1g39420.v2.2 ... Sp2g08490.v2.2, Sp3g13810.v2.2, Sp3g20710.v2.2, Sp5g35420.v2.2, Sp7g12650.v2.2
Brassicaceae	Brassica nigra	14	BniB01g039230.2N, BniB01g049370.2N, BniB02g001600.2N ... BniB03g024980.2N, BniB03g026360.2N, BniB04g012970.2N, BniB04g017520.2N, BniB04g056820.2N, BniB06g046640.2N, BniB06g068540.2N, BniB07g020240.2N, BniB07g028320.2N, BniB07g048870.2N, BniB07g054140.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq02G0235, Ceq06G1392, Ceq07G0380, Ceq07G1240, Ceq08G2221
Casuarinaceae	Casuarina glauca	3	Cgl02G0256, Cgl07G0392, Cgl08G2374
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno01g01300, gene.Cymno06g12840, gene.Cymno12g00360
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate02g32970, gene.Thate02g40880, gene.Thate03g20010 ... gene.Thate07g14490, gene.Thate08g10950
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-12086, nbisL1-mrna-5001, nbisL1-mrna-6330
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG01.392, evm.TU.LG01.393, evm.TU.LG03.2257 ... evm.TU.LG04.1188, evm.TU.LG07.1028, evm.TU.LG11.908
Plantaginaceae	Plantago ovata	4	Pov_00007916, Pov_00015441, Pov_00015443, Pov_00024673
Plumbaginaceae	Limonium bicolor	7	Lb0G37175, Lb1G06945, Lb1G07954, Lb2G10316, Lb4G22668 ... Lb4G23912, Lb5G28968
Poaceae	Echinochloa crus-galli	20	AH01.1212, AH01.223, AH02.437, AH03.418, AH05.1143, BH01.524 ... AH05.3970, AH06.2185, AH06.2187, BH02.454, BH03.509, BH05.1348, BH05.4064, CH01.1437, CH01.380, CH02.501, CH03.598, CH04.2219, CH05.4271, CH06.2216
Poaceae	Eleusine coracana subsp. coracana	16	gene-QOZ80_1AG0011990, gene-QOZ80_1BG0060570 ... gene-QOZ80_3AG0212410, gene-QOZ80_3AG0225040, gene-QOZ80_3BG0257620, gene-QOZ80_3BG0270300, gene-QOZ80_5AG0396900, gene-QOZ80_5AG0402820, gene-QOZ80_5AG0402840, gene-QOZ80_5BG0445390, gene-QOZ80_5BG0451310, gene-QOZ80_6AG0544070, gene-QOZ80_6BG0497520, gene-QOZ80_7AG0558390, gene-QOZ80_7BG0589570, gene-QOZ80_UnG0727940
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.1HG0027200.1, HORVU.MOREX.r3.1HG0082640.1 ... HORVU.MOREX.r3.3HG0239900.1, HORVU.MOREX.r3.5HG0433440.1, HORVU.MOREX.r3.5HG0509090.1, HORVU.MOREX.r3.5HG0519690.1, HORVU.MOREX.r3.7HG0714400.1
Poaceae	Lolium multiflorum	9	gene-QYE76_000678, gene-QYE76_000681, gene-QYE76_009739 ... gene-QYE76_010026, gene-QYE76_032536, gene-QYE76_034879, gene-QYE76_042860, gene-QYE76_061216, gene-QYE76_062928
Poaceae	Oryza coarctata	14	Oco01G003280, Oco05G018550, Oco05G026110, Oco06G019320 ... Oco06G027010, Oco09G003530, Oco09G005130, Oco10G003520, Oco11G012110, Oco12G012270, Oco13G002630, Oco14G002930, Oco23G009910, Oco24G009590
Poaceae	Oryza sativa	7	LOC_Os01g08320.1, LOC_Os03g43410.1, LOC_Os03g58350.1 ... LOC_Os05g08570.1, LOC_Os06g39590.1, LOC_Os07g08460.1, LOC_Os12g40900.1
Poaceae	Paspalum vaginatum	7	gene-BS78_01G050000, gene-BS78_01G148600 ... gene-BS78_02G057300, gene-BS78_03G042000, gene-BS78_08G135900, gene-BS78_09G070300, gene-BS78_10G180800
Poaceae	Puccinellia tenuiflora	11	Pt_Chr0104449, Pt_Chr0105410, Pt_Chr0105493, Pt_Chr0200290 ... Pt_Chr0303715, Pt_Chr0303718, Pt_Chr0400609, Pt_Chr0501631, Pt_Chr0501644, Pt_Chr0502774, Pt_Chr0704301
Poaceae	Sporobolus alterniflorus	19	Chr01G002730, Chr01G009800, Chr01G011540, Chr02G020110 ... Chr02G029600, Chr03G005580, Chr04G018590, Chr05G007250, Chr05G011010, Chr06G019370, Chr07G029520, Chr08G006030, Chr12G027200, Chr12G034600, Chr18G000020, Chr19G008030, Chr22G014010, Chr27G008630, Chr28G002060
Poaceae	Thinopyrum elongatum	6	Tel1E01G218900, Tel3E01G209200, Tel5E01G125700 ... Tel5E01G602100, Tel5E01G691800, Tel7E01G603900
Poaceae	Triticum dicoccoides	13	gene_TRIDC1AG013630, gene_TRIDC1BG020760 ... gene_TRIDC3AG015130, gene_TRIDC3BG019700, gene_TRIDC5AG008910, gene_TRIDC5AG055310, gene_TRIDC5AG063450, gene_TRIDC5BG009690, gene_TRIDC5BG059330, gene_TRIDC5BG059350, gene_TRIDC5BG067960, gene_TRIDC7AG051940, gene_TRIDC7BG041950
Poaceae	Triticum aestivum	17	TraesCS1A02G118400.2, TraesCS1B02G138100.1 ... TraesCS1D02G119500.1, TraesCS3A02G121300.2, TraesCS3B02G140700.1, TraesCS3D02G123400.1, TraesCS5A02G058700.1, TraesCS5A02G378200.1, TraesCS5B02G058800.1, TraesCS5B02G381800.1, TraesCS5B02G446100.1, TraesCS5D02G069200.1, TraesCS5D02G388200.1, TraesCS5D02G449400.1, TraesCS7A02G371500.1, TraesCS7B02G256100.1, TraesCS7D02G351400.1
Poaceae	Zea mays	8	Zm00001eb031190_P003, Zm00001eb051060_P001 ... Zm00001eb060950_P002, Zm00001eb122410_P001, Zm00001eb135570_P001, Zm00001eb212890_P001, Zm00001eb218860_P001, Zm00001eb301590_P001
Poaceae	Zoysia japonica	13	nbis-gene-10124, nbis-gene-13199, nbis-gene-15358 ... nbis-gene-16473, nbis-gene-20405, nbis-gene-23573, nbis-gene-26796, nbis-gene-35645, nbis-gene-39667, nbis-gene-41100, nbis-gene-44585, nbis-gene-47575, nbis-gene-6800
Poaceae	Zoysia macrostachya	13	Zma_g10066, Zma_g25293, Zma_g2576, Zma_g26086, Zma_g26532 ... Zma_g282, Zma_g30764, Zma_g3229, Zma_g33011, Zma_g4824, Zma_g6101, Zma_g7724, Zma_g908
Portulacaceae	Portulaca oleracea	10	evm.TU.LG01.2867, evm.TU.LG02.1144, evm.TU.LG06.1191 ... evm.TU.LG06.1192, evm.TU.LG07.1721, evm.TU.LG08.523, evm.TU.LG09.829, evm.TU.LG11.549, evm.TU.LG22.1550, evm.TU.LG22.1551
Posidoniaceae	Posidonia oceanica	4	gene.Posoc03g02700, gene.Posoc03g24490, gene.Posoc08g15440 ... gene.Posoc09g11700
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_10_RagTag.1245, evm.TU.Scaffold_1_RagTag.279 ... evm.TU.Scaffold_3_RagTag.373, evm.TU.Scaffold_5_RagTag.1056, evm.TU.Scaffold_6_RagTag.816
Rhizophoraceae	Carallia pectinifolia	8	nbisL1-mrna-11297, nbisL1-mrna-1552, nbisL1-mrna-15870 ... nbisL1-mrna-27844, nbisL1-mrna-3361, nbisL1-mrna-6894, nbisL1-mrna-6957, nbisL1-mrna-7920
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-10681, nbisL1-mrna-17103, nbisL1-mrna-17360 ... nbisL1-mrna-19000, nbisL1-mrna-7609
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-10333, nbisL1-mrna-16998, nbisL1-mrna-5338 ... nbisL1-mrna-6112, nbisL1-mrna-692
Rhizophoraceae	Kandelia candel	5	evm.TU.utg000004l.374, evm.TU.utg000006l.350 ... evm.TU.utg000011l.504, evm.TU.utg000012l.189, evm.TU.utg000019l.1002
Rhizophoraceae	Kandelia obovata	5	Maker00004129, Maker00007359, Maker00011048, Maker00012608 ... Maker00012959
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-15256, nbisL1-mrna-16376, nbisL1-mrna-6403 ... nbisL1-mrna-7771, nbisL1-mrna-9937
Rhizophoraceae	Rhizophora mangle	6	nbisL1-mrna-18031, nbisL1-mrna-19763, nbisL1-mrna-21242 ... nbisL1-mrna-2189, nbisL1-mrna-254, nbisL1-mrna-4223
Salicaceae	Populus euphratica	9	populus_peu02796, populus_peu07467, populus_peu13585 ... populus_peu15126, populus_peu15927, populus_peu21479, populus_peu32788, populus_peu33716, populus_peu37058
Solanaceae	Lycium barbarum	8	gene-LOC132598510, gene-LOC132602370, gene-LOC132604923 ... gene-LOC132607953, gene-LOC132610499, gene-LOC132618705, gene-LOC132633356, gene-LOC132642611
Solanaceae	Solanum chilense	7	SOLCI000980000, SOLCI001138400, SOLCI002281300 ... SOLCI002322300, SOLCI002322400, SOLCI005451800, SOLCI007522000
Solanaceae	Solanum pennellii	9	gene-LOC107012943, gene-LOC107015399, gene-LOC107015632 ... gene-LOC107021028, gene-LOC107021292, gene-LOC107022060, gene-LOC107022782, gene-LOC107029221, gene-LOC107031598
Tamaricaceae	Reaumuria soongarica	6	STRG.14871_chr08_+, STRG.17640_chr09_+, STRG.28468_chr04_+ ... gene_10913, gene_4887, gene_4889
Tamaricaceae	Tamarix chinensis	5	TC02G3468, TC05G1187, TC07G2313, TC08G2098, TC08G2099
Zosteraceae	Zostera marina	5	Zosma01g05970.v3.1, Zosma01g08410.v3.1, Zosma05g32570.v3.1 ... Zosma06g12240.v3.1, Zosma06g24030.v3.1