Basic Information
Locus ID:
gene-LOC107022514
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 59117605 | 59118928 | + | gene-LOC107022514 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 47,243.45 Da | 32.33 | 99.29 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 15 | 59 | 1.3E-5 | IPR001810 |
| Pfam | PF07734 | F-box associated | 237 | 279 | 3.7E-5 | IPR006527 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 64 | 1.31E-8 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 127 | 294 | 8.37E-6 | IPR011043 |
| Gene3D | G3DSA:1.20.1280.50 | - | 11 | 65 | 3.3E-6 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 138 | 296 | 1.6E-21 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 11 | 59 | 10.795695 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015078598.1 | putative F-box protein At1g32420 [Solanum pennellii] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599762 |
| Solanaceae | Solanum chilense | 3 | SOLCI000907300, SOLCI001142300, SOLCI001142400 |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107022514, gene-LOC107022919, gene-LOC114074350 ... |