Basic Information
Locus ID:
gene-LOC107022316
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 39543348 | 39549842 | - | gene-LOC107022316 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 52,310.05 Da | 44.50 | 105.47 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 122 | 406 | 6.02E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 409 | 2.7E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 88 | 280 | 2.7E-21 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 347 | 372 | 29.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 215 | 240 | 0.029 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 163 | 188 | 6.1E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 189 | 214 | 150.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 374 | 398 | 680.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 295 | 320 | 560.0 | IPR006553 |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_027773739.1 | EIN3-binding F-box protein 1-like [Solanum pennellii] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BUA4 | F-box domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_004415 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology