Basic Information
Locus ID:
gene-LOC107022035
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase C terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 2579684 | 2589085 | - | gene-LOC107022035 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 59,137.54 Da | 36.68 | 68.99 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 106 | 470 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 109 | 406 | 4.1E-65 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 425 | 469 | 2.5E-5 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 84 | 460 | 3.24E-89 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 106 | 191 | 2.4E-64 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 302 | 424 | 1.9E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 425 | 435 | 1.9E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 192 | 257 | 2.4E-64 | - |
| SMART | SM00133 | pkinase_C_6 | 407 | 471 | 1.2E-9 | IPR000961 |
| SMART | SM00220 | serkin_6 | 108 | 406 | 1.1E-104 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 407 | 479 | 14.777037 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 108 | 406 | 47.777878 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 227 | 239 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 114 | 137 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 291 | - | - |
| Coils | Coil | Coil | 50 | 70 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03920.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_004240493.1 | serine/threonine-protein kinase tricorner [Solanum lycopersicum] | 0 |
| Q9Y2H1 | Serine/threonine-protein kinase 38-like OS=Homo sapiens OX=9606 GN=STK38L PE=1 SV=3 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology