Basic Information
Locus ID:
gene-LOC107020481
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 144950 | 150607 | - | gene-LOC107020481 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 67,116.15 Da | 37.29 | 97.31 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 2.1E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 281 | 552 | 7.5E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 5.9E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 166 | 2.76E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 257 | 555 | 4.99E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 249 | 356 | 2.5E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 180 | 2.8E-44 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 573 | 5.6E-64 | - |
| SMART | SM00220 | serkin_6 | 280 | 554 | 1.5E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 564 | 36.357609 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 403 | 415 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 286 | 308 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 584 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_015076354.1 | protein NSP-INTERACTING KINASE 3-like [Solanum pennellii] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology