Basic Information
Locus ID:
gene-LOC107020392
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 27052593 | 27057906 | + | gene-LOC107020392 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 65,846.57 Da | 45.59 | 82.95 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 132 | 394 | 8.52696E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 133 | 395 | 4.0E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 426 | 576 | 3.77E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 131 | 423 | 7.82E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 222 | 406 | 3.1E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 413 | 504 | 1.5E-17 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 420 | 573 | 1.5E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 126 | 221 | 2.7E-24 | - |
| SMART | SM00220 | serkin_6 | 133 | 395 | 1.9E-100 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 437 | 472 | 8.348522 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 133 | 395 | 51.70713 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 257 | 269 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 139 | 165 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_015076220.1 | CDPK-related kinase 5-like [Solanum pennellii] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology