Basic Information
Locus ID:
gene-LOC107020290
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2828288 | 2837132 | + | gene-LOC107020290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 194,949.75 Da | 53.30 | 75.44 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1466 | 1729 | 2.49727E-149 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 371 | 643 | 2.57029E-133 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 391 | 632 | 2.2E-33 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1505 | 1671 | 1.3E-33 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1462 | 1729 | 1.18E-81 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 35 | 110 | 2.06E-5 | IPR011011 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 392 | 629 | 1.92E-5 | IPR027410 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 437 | 609 | 1.2E-40 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1421 | 1586 | 8.5E-37 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 436 | 609 | 3.6E-53 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1588 | 1730 | 2.1E-42 | - |
| SMART | SM00330 | PIPK_2 | 1439 | 1730 | 3.3E-124 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1409 | 1729 | 60.685432 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 34 | 109 | 8.743437 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1140 | 1156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1223 | 1245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1159 | 1208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1140 | 1208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 780 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_015076071.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Solanum pennellii] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology