Basic Information
Locus ID:
gene-LOC107019930
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 1063864 | 1065720 | - | gene-LOC107019930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 63,649.83 Da | 42.55 | 95.73 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 50 | 2.9E-6 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 75 | 315 | 6.46E-12 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 54 | 3.14E-5 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 325 | 5.6E-8 | IPR032675 |
| SMART | SM00256 | fbox_2 | 16 | 56 | 0.0038 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015075773.1 | uncharacterized protein LOC107019930 [Solanum pennellii] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 1 | gene-LOC132642694 |
| Solanaceae | Solanum chilense | 1 | SOLCI005516500 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107019930, gene-LOC114077224 |