Basic Information
Locus ID:
gene-LOC107019169
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
PRK1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 70778794 | 70782388 | - | gene-LOC107019169 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.33 | 74,401.27 Da | 32.26 | 89.88 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 369 | 635 | 1.4E-26 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 139 | 192 | 3.3E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 80 | 3.5E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 72 | 225 | 4.91E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 369 | 639 | 1.25E-45 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 440 | 2.7E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 655 | 2.0E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 248 | 2.8E-37 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 365 | 650 | 24.569851 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 371 | 393 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 307 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G07040.1 | Leucine-rich repeat protein kinase family protein. Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. | 0 |
| RefSeq | XP_015075229.1 | pollen receptor-like kinase 2 [Solanum pennellii] | 0 |
| Q84JQ4 | Pollen receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PRK2 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology