Basic Information
Locus ID:
gene-LOC107018896
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 76828 | 80387 | + | gene-LOC107018896 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 71,948.28 Da | 37.68 | 87.40 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 332 | 596 | 1.18139E-93 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 146 | 240 | 4.5E-13 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 327 | 592 | 1.6E-45 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 39 | 130 | 5.5E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 625 | 2.83E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 286 | 401 | 7.0E-32 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 139 | 242 | 8.7E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 29 | 133 | 1.2E-13 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 402 | 605 | 3.9E-61 | - |
| SMART | SM00220 | serkin_6 | 326 | 575 | 2.9E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 326 | 609 | 37.67207 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 139 | 242 | 16.000036 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 133 | 15.393546 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 447 | 459 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 332 | 354 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 649 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 643 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70530.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 3. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015074969.1 | cysteine-rich receptor-like protein kinase 3 [Solanum pennellii] | 0 |
| Q9CAL2 | Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology