Basic Information
Locus ID:
gene-LOC107018827
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine-rich repeat receptor-like protein kinase TDR
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 73872922 | 73878758 | + | gene-LOC107018827 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 112,839.86 Da | 34.82 | 95.08 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 73 | 2.3E-6 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 364 | 381 | 0.65 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 713 | 985 | 2.3E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 102 | 120 | 1.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 272 | 330 | 5.2E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 534 | 554 | 0.88 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 286 | 599 | 1.18E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 713 | 987 | 7.28E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 386 | 1.02E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 790 | 4.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 791 | 999 | 6.2E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 239 | 336 | 7.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 143 | 2.5E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 238 | 9.2E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 337 | 635 | 5.9E-82 | IPR032675 |
| SMART | SM00220 | serkin_6 | 710 | 991 | 3.4E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 341 | 364 | 6.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 317 | 26.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 991 | 37.573132 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 838 | 850 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015074895.1 | leucine-rich repeat receptor-like protein kinase TDR [Solanum pennellii] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology