Basic Information
Locus ID:
gene-LOC107018620
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
WRKY4
Description:
WRKY transcription factor 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 6485945 | 6491270 | + | gene-LOC107018620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 55,550.56 Da | 67.49 | 53.39 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 216 | 272 | 1.2E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 395 | 452 | 1.2E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 386 | 454 | 5.75E-30 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 213 | 274 | 2.22E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 379 | 455 | 6.0E-37 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 207 | 275 | 7.1E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 215 | 273 | 7.5E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 394 | 453 | 2.9E-40 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 389 | 454 | 39.19194 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 216 | 274 | 24.099157 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 362 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_015074633.1 | probable WRKY transcription factor 4 [Solanum pennellii] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology