Basic Information
Locus ID:
gene-LOC107017829
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 73874937 | 73884150 | + | gene-LOC107017829 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 93,898.69 Da | 50.57 | 78.25 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11445 | bHLH_AtPIF_like | 134 | 196 | 3.68855E-36 | - |
| CDD | cd14066 | STKc_IRAK | 517 | 783 | 2.20832E-103 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 138 | 184 | 5.8E-14 | IPR011598 |
| Pfam | PF00069 | Protein kinase domain | 512 | 780 | 9.4E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 491 | 783 | 2.56E-80 | IPR011009 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 131 | 193 | 3.4E-19 | IPR036638 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 587 | 796 | 5.6E-61 | - |
| Gene3D | G3DSA:4.10.280.10 | - | 129 | 192 | 4.0E-21 | IPR036638 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 474 | 586 | 6.7E-33 | - |
| SMART | SM00353 | finulus | 140 | 189 | 7.6E-18 | IPR011598 |
| SMART | SM00220 | serkin_6 | 511 | 789 | 3.0E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 511 | 790 | 37.855812 | IPR000719 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 134 | 183 | 17.840874 | IPR011598 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 633 | 645 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 517 | 539 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 822 | 837 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 814 | 846 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 325 | - | - |
| Coils | Coil | Coil | 173 | 193 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02630.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015073590.2 | probable serine/threonine-protein kinase At1g01540 [Solanum pennellii] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology