Basic Information
Locus ID:
gene-LOC107017714
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 5663434 | 5670289 | + | gene-LOC107017714 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 77,673.15 Da | 44.68 | 81.43 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 370 | 663 | 2.30477E-122 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 339 | 649 | 3.4E-91 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 370 | 675 | 2.73E-68 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 375 | 668 | 2.4E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 213 | - | - |
| Coils | Coil | Coil | 249 | 269 | - | - |
| Coils | Coil | Coil | 301 | 321 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_027772040.1 | probable galacturonosyltransferase 4 isoform X1 [Solanum pennellii] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology