Basic Information
Locus ID:
gene-LOC107017696
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 1444067 | 1453657 | - | gene-LOC107017696 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 188,883.38 Da | 48.59 | 74.76 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 355 | 627 | 6.22031E-125 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1409 | 1672 | 1.40519E-140 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 376 | 640 | 1.1E-32 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1448 | 1614 | 3.8E-34 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1404 | 1672 | 9.81E-82 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 28 | 97 | 1.34E-5 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 421 | 593 | 4.71E-42 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1367 | 1529 | 6.8E-38 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1532 | 1673 | 5.4E-41 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 420 | 593 | 9.9E-53 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1375 | 1673 | 7.1E-125 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1352 | 1672 | 60.796177 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1085 | 1108 | - | - |
| Coils | Coil | Coil | 954 | 974 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_015073406.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Solanum pennellii] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology