Basic Information
Locus ID:
gene-LOC107017442
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 68186417 | 68188922 | - | gene-LOC107017442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 75,737.91 Da | 44.33 | 84.79 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 362 | 627 | 5.54423E-86 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 15 | 244 | 8.40326E-54 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 357 | 623 | 3.9E-40 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 32 | 242 | 5.3E-37 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 18 | 241 | 5.77E-41 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 645 | 2.05E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 434 | 1.0E-22 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 19 | 243 | 5.7E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 631 | 1.0E-61 | - |
| SMART | SM00220 | serkin_6 | 356 | 633 | 2.5E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 356 | 633 | 33.658016 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 481 | 493 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 362 | 384 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_015073156.1 | L-type lectin-domain containing receptor kinase S.6 [Solanum pennellii] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology