Basic Information
Locus ID:
gene-LOC107017275
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 76376942 | 76379974 | - | gene-LOC107017275 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 34,411.72 Da | 47.43 | 80.16 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00693 | secretory_peroxidase | 20 | 313 | 8.81694E-178 | IPR033905 |
| Pfam | PF00141 | Peroxidase | 37 | 281 | 1.2E-76 | IPR002016 |
| SUPERFAMILY | SSF48113 | Heme-dependent peroxidases | 20 | 314 | 1.12E-103 | IPR010255 |
| Gene3D | G3DSA:1.10.520.10 | - | 23 | 314 | 1.2E-119 | - |
| Gene3D | G3DSA:1.10.420.10 | Peroxidase, domain 2 | 155 | 296 | 1.2E-119 | - |
| ProSiteProfiles | PS50873 | Plant heme peroxidase family profile. | 19 | 314 | 76.796249 | IPR002016 |
| ProSitePatterns | PS00435 | Peroxidases proximal heme-ligand signature. | 177 | 187 | - | IPR019793 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 237 | 252 | 8.7E-31 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 112 | 129 | 8.7E-31 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 130 | 142 | 8.7E-31 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 51 | 65 | 8.7E-31 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 177 | 192 | 8.7E-31 | IPR002016 |
| PRINTS | PR00461 | Plant peroxidase signature | 53 | 73 | 6.2E-49 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 235 | 250 | 6.2E-49 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 111 | 121 | 6.2E-49 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 176 | 188 | 6.2E-49 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 29 | 48 | 6.2E-49 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 92 | 105 | 6.2E-49 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 251 | 268 | 6.2E-49 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 291 | 304 | 6.2E-49 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 130 | 145 | 6.2E-49 | IPR000823 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42180.1 | Peroxidase superfamily protein. | 0 |
| RefSeq | XP_015073023.1 | peroxidase 64-like [Solanum pennellii] | 0 |
| Q43872 | Peroxidase 64 OS=Arabidopsis thaliana OX=3702 GN=PER64 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg10151, jg32987, jg34007, jg6374 |
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_16856, gene_3165, gene_3166 |
| Amaranthaceae | Atriplex hortensis | 4 | Ah018997, Ah018999, Ah019000, Ah027228 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g134170 |
| Amaranthaceae | Salicornia bigelovii | 13 | Sbi_jg12619, Sbi_jg12620, Sbi_jg15459, Sbi_jg15462 ... |
| Amaranthaceae | Salicornia europaea | 5 | Seu_jg26741, Seu_jg26745, Seu_jg26747, Seu_jg8598 ... |
| Amaranthaceae | Suaeda aralocaspica | 7 | GOSA_00004237, GOSA_00006617, GOSA_00006618, GOSA_00006619 ... |
| Amaranthaceae | Suaeda glauca | 11 | Sgl02076, Sgl02077, Sgl07229, Sgl07230, Sgl07231, Sgl12449 ... |
| Amaranthaceae | Chenopodium album | 8 | gene:ENSEOMG00000002066, gene:ENSEOMG00000002084 ... |
| Amaranthaceae | Chenopodium quinoa | 9 | CQ.Regalona.r1.3AG0002080, CQ.Regalona.r1.3AG0002090 ... |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30049000, pistato.v30182020, pistato.v30211420 |
| Apiaceae | Apium graveolens | 2 | Ag1G01147, Ag4G01841 |
| Arecaceae | Cocos nucifera | 1 | COCNU_08G008930 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103718926, gene-LOC103722765 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2550.V1.1 |
| Asteraceae | Flaveria trinervia | 8 | Ftri17G13314, Ftri18G23195, Ftri18G29385, Ftri1G12150 ... |
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G42180.1, AT5G51890.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10014117m.g.v1.0, Thhalv10027848m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g14150.v2.2, Sp7g08620.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB02g029390.2N, BniB02g059770.2N, BniB03g064030.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq02G2063, Ceq03G0838, Ceq06G0120 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl02G2133, Cgl03G0912, Cgl06G0132 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno09g00580 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10448 |
| Nitrariaceae | Nitraria sibirica | 3 | evm.TU.LG01.2224, evm.TU.LG01.2225, evm.TU.LG06.166 |
| Plantaginaceae | Plantago ovata | 4 | Pov_00003474, Pov_00020632, Pov_00040888, Pov_00040890 |
| Plumbaginaceae | Limonium bicolor | 8 | Lb1G04392, Lb1G04394, Lb1G04434, Lb1G04435, Lb1G04437 ... |
| Poaceae | Echinochloa crus-galli | 3 | AH07.4065, CH07.3941, Contig1026.7 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0151810, gene-QOZ80_2BG0207190 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_051382, gene-QYE76_051383 |
| Poaceae | Oryza coarctata | 2 | Oco03G026450, Oco04G026840 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g58720.2 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G331700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0300074 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr15G000020 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G788100, Tel3E01G003500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG066170, gene_TRIDC2BG071340 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G467000.1.cds1, TraesCS2B02G489800.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb240670_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-8228 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g14776 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG03.1496, evm.TU.LG11.1576, evm.TU.LG12.158 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc06g09020, gene.Posoc08g05580 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.1317 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12626, nbisL1-mrna-9102 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-18558, nbisL1-mrna-20477 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-12894, nbisL1-mrna-15340, nbisL1-mrna-15341 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000010l.338, evm.TU.utg000018l.439 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00003067, Maker00008812 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-1041, nbisL1-mrna-3311 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-11157, nbisL1-mrna-20641 |
| Salicaceae | Populus euphratica | 3 | populus_peu14089, populus_peu29233, populus_peu33040 |
| Solanaceae | Lycium barbarum | 8 | gene-LOC132602573, gene-LOC132604169, gene-LOC132621978 ... |
| Solanaceae | Solanum chilense | 5 | SOLCI004380800, SOLCI005347500, SOLCI006234400 ... |
| Solanaceae | Solanum pennellii | 5 | gene-LOC107006734, gene-LOC107009520, gene-LOC107010550 ... |
| Tamaricaceae | Reaumuria soongarica | 3 | gene_2500, gene_3090, gene_4120 |
| Tamaricaceae | Tamarix chinensis | 3 | TC01G2471, TC05G0301, TC06G1760 |
| Zosteraceae | Zostera marina | 1 | Zosma05g31120.v3.1 |