Basic Information
Locus ID:
gene-LOC107017026
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 71841084 | 71845257 | - | gene-LOC107017026 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.59 | 30,530.09 Da | 38.87 | 92.03 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 4 | 252 | 4.55484E-136 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2 | 252 | 6.3E-66 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 252 | 1.48E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 75 | 1.9E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 77 | 263 | 3.3E-61 | - |
| SMART | SM00220 | serkin_6 | 1 | 256 | 1.8E-49 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 1 | 263 | 6.3E-73 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 256 | 43.495277 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 119 | 131 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 4 | 25 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 113 | 131 | 3.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 223 | 245 | 3.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 72 | 85 | 3.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 160 | 170 | 3.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 179 | 201 | 3.3E-14 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_027772422.1 | serine/threonine-protein kinase CTR1, partial [Solanum pennellii] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0V0IY72 | Putative serine/threonine-protein kinase CTR1-like OS=Solanum chacoense OX=4108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology