Basic Information
Locus ID:
gene-LOC107016200
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 5151555 | 5155723 | + | gene-LOC107016200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 42,923.17 Da | 53.77 | 80.21 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 86 | 333 | 6.22608E-128 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 81 | 333 | 3.1E-68 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 60 | 333 | 5.46E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 68 | 161 | 4.2E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 348 | 4.6E-61 | - |
| SMART | SM00220 | serkin_6 | 79 | 340 | 1.8E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 79 | 336 | 42.322155 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 201 | 213 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 195 | 213 | 4.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 304 | 326 | 4.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 157 | 170 | 4.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 260 | 282 | 4.7E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 241 | 251 | 4.7E-19 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004236673.1 | serine/threonine-protein kinase HT1 [Solanum lycopersicum] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology