Basic Information
Locus ID:
gene-LOC107015273
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 56627788 | 56632352 | - | gene-LOC107015273 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 111,540.05 Da | 27.81 | 101.26 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 272 | 331 | 4.1E-10 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 559 | 579 | 1.3 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 713 | 982 | 5.3E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 75 | 4.9E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 713 | 985 | 9.58E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 63 | 402 | 1.05E-64 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 287 | 610 | 1.18E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 389 | 4.7E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 509 | 630 | 1.2E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 701 | 788 | 4.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 390 | 460 | 6.1E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 789 | 997 | 1.9E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 461 | 508 | 5.1E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 192 | 1.1E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 287 | 2.3E-24 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 342 | 365 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 580 | 99.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 318 | 340 | 310.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 710 | 989 | 1.9E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 198 | 223 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 317 | 0.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 270 | 293 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 126 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 350.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 989 | 37.544865 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 836 | 848 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 716 | 739 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 438 | 451 | 9.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 297 | 310 | 9.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015070977.1 | leucine-rich repeat receptor-like protein kinase TDR [Solanum pennellii] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology