halophFGD

Basic Information

Locus ID: gene-LOC107015265

Species & Taxonomic ID: Solanum pennellii & 28526

Genome Assembly: GCF_001406875.1

Description: galactosyl transferase GMA12/MNN10 family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	69828094	69831773	-	gene-LOC107015265

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.98	51,142.53 Da	32.08	82.38	-0.40

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF05637	galactosyl transferase GMA12/MNN10 family	141	379	1.9E-69	IPR008630
Gene3D	G3DSA:3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	140	289	4.4E-21	IPR029044
MobiDBLite	mobidb-lite	consensus disorder prediction	1	34	-	-

Gene Ontology

Molecular Function:

GO:0016757 (glycosyltransferase activity)

Cellular Component:

GO:0016020 (membrane)

KEGG Pathway

KO Term:

K08238 (xyloglucan 6-xylosyltransferase [EC:2.4.2.39])

Best hit

Source	Best Hit ID	Description
TAIR	AT1G74380.1	xyloglucan xylosyltransferase 5.
RefSeq	XP_015070969.1	probable xyloglucan 6-xylosyltransferase 5 [Solanum pennellii]
Swiss-Prot	Q9CA75	Probable xyloglucan 6-xylosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=XXT5 PE=1 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	10	jg12430, jg13142, jg25737, jg28033, jg28034, jg30724, jg5669 ... jg39926, jg39927, jg9305
Aizoaceae	Mesembryanthemum crystallinum	5	gene_16759, gene_18272, gene_18784, gene_24015, gene_5201
Amaranthaceae	Atriplex hortensis	5	Ah000793, Ah000795, Ah013111, Ah020895, Ah029959
Amaranthaceae	Beta vulgaris	3	BVRB_5g114200, BVRB_6g128320, BVRB_6g153310
Amaranthaceae	Salicornia bigelovii	10	Sbi_jg13191, Sbi_jg1394, Sbi_jg31038, Sbi_jg35183 ... Sbi_jg42984, Sbi_jg45593, Sbi_jg52578, Sbi_jg58244, Sbi_jg59731, Sbi_jg62830
Amaranthaceae	Salicornia europaea	5	Seu_jg11439, Seu_jg24009, Seu_jg25849, Seu_jg3343 ... Seu_jg9196
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00002097, GOSA_00003482, GOSA_00004709, GOSA_00010093 ... GOSA_00020653
Amaranthaceae	Suaeda glauca	10	Sgl03880, Sgl09903, Sgl34575, Sgl35667, Sgl39992, Sgl41008 ... Sgl54783, Sgl60086, Sgl73733, Sgl77232
Amaranthaceae	Chenopodium album	11	gene:ENSEOMG00000000490, gene:ENSEOMG00000003458 ... gene:ENSEOMG00000004343, gene:ENSEOMG00000006381, gene:ENSEOMG00000013468, gene:ENSEOMG00000014327, gene:ENSEOMG00000021323, gene:ENSEOMG00000027161, gene:ENSEOMG00000027566, gene:ENSEOMG00000029945, gene:ENSEOMG00000043939
Amaranthaceae	Chenopodium quinoa	14	CQ.Regalona.r1.3AG0016140, CQ.Regalona.r1.3BG0017140 ... CQ.Regalona.r1.5AG0020170, CQ.Regalona.r1.5AG0020190, CQ.Regalona.r1.5BG0021520, CQ.Regalona.r1.5BG0021540, CQ.Regalona.r1.5BG0021550, CQ.Regalona.r1.6AG0000520, CQ.Regalona.r1.6AG0026450, CQ.Regalona.r1.6BG0000500, CQ.Regalona.r1.6BG0027880, CQ.Regalona.r1.7AG0013550, CQ.Regalona.r1.7AG0013740, CQ.Regalona.r1.7BG0015510
Anacardiaceae	Pistacia vera	4	pistato.v30009320, pistato.v30204880, pistato.v30234510 ... pistato.v30286930
Apiaceae	Apium graveolens	9	Ag10G00374, Ag1G00705, Ag4G00376, Ag4G00583, Ag4G00584 ... Ag5G00039, Ag5G00596, Ag9G01930, AgUnG01358
Arecaceae	Cocos nucifera	8	COCNU_02G009580, COCNU_02G016320, COCNU_05G003590 ... COCNU_07G008480, COCNU_13G007290, COCNU_16G003870, scaffold028293G000030, scaffold033932G000010
Arecaceae	Phoenix dactylifera	12	gene-LOC103703068, gene-LOC103703596, gene-LOC103706101 ... gene-LOC103707928, gene-LOC103711342, gene-LOC103711443, gene-LOC103715401, gene-LOC103718958, gene-LOC120105043, gene-LOC120105696, gene-LOC120112124, gene-LOC120113225
Asparagaceae	Asparagus officinalis	4	AsparagusV1_07.1451.V1.1, AsparagusV1_07.1452.V1.1 ... AsparagusV1_08.1181.V1.1, AsparagusV1_08.908.V1.1
Asteraceae	Flaveria trinervia	8	Ftri13G29774, Ftri14G16502, Ftri18G14613, Ftri18G19297 ... Ftri1G04521, Ftri1G10314, Ftri1G21135, Ftri7G29963
Brassicaceae	Arabidopsis thaliana	8	AT1G18690.1, AT1G74380.1, AT2G22900.1, AT3G62720.1 ... AT4G02500.1, AT4G37690.1, AT4G38310.1, AT5G07720.1
Brassicaceae	Eutrema salsugineum	7	Thhalv10000162m.g.v1.0, Thhalv10005949m.g.v1.0 ... Thhalv10007657m.g.v1.0, Thhalv10013509m.g.v1.0, Thhalv10018522m.g.v1.0, Thhalv10027092m.g.v1.0, Thhalv10028641m.g.v1.0
Brassicaceae	Schrenkiella parvula	7	Sp1g16670.v2.2, Sp4g01940.v2.2, Sp5g00800.v2.2 ... Sp5g29540.v2.2, Sp6g02410.v2.2, Sp6g35180.v2.2, Sp7g35340.v2.2
Brassicaceae	Brassica nigra	10	BniB02g019680.2N, BniB02g053250.2N, BniB02g088730.2N ... BniB03g052870.2N, BniB04g033250.2N, BniB05g055000.2N, BniB06g047940.2N, BniB06g061470.2N, BniB08g045110.2N, BniB08g076800.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq05G1451, Ceq07G0182, Ceq07G0183, Ceq09G1156
Casuarinaceae	Casuarina glauca	6	Cgl01G2020, Cgl05G1451, Cgl06G0966, Cgl07G0185, Cgl07G0186 ... Cgl09G1244
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g11690, gene.Cymno09g06720, gene.Cymno11g03980 ... gene.Cymno13g01630
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate07g09440, gene.Thate07g11120, gene.Thate08g12960 ... gene.Thate09g10760
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-5076
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG02.2581, evm.TU.LG04.330, evm.TU.LG10.626 ... evm.TU.LG11.1312
Plantaginaceae	Plantago ovata	10	Pov_00011904, Pov_00011908, Pov_00022583, Pov_00022586 ... Pov_00023774, Pov_00023775, Pov_00023776, Pov_00026138, Pov_00026139, Pov_00035799
Plumbaginaceae	Limonium bicolor	4	Lb1G05457, Lb1G07540, Lb1G07541, Lb6G30623
Poaceae	Echinochloa crus-galli	28	AH01.3888, AH01.3889, AH04.1555, AH04.1556, AH04.1561 ... AH05.200, AH05.201, AH07.2029, AH07.3278, BH01.4224, BH01.4225, BH01.4284, BH01.4290, BH04.1567, BH04.1568, BH04.1574, BH05.230, BH05.231, BH07.1996, BH07.3097, BH07.3098, CH01.4514, CH01.4515, CH04.1784, CH05.283, CH05.284, CH07.1845, CH07.3165
Poaceae	Eleusine coracana subsp. coracana	25	gene-QOZ80_2AG0132710, gene-QOZ80_2AG0143860 ... gene-QOZ80_2BG0188100, gene-QOZ80_2BG0199270, gene-QOZ80_3AG0244920, gene-QOZ80_3AG0245350, gene-QOZ80_3AG0245360, gene-QOZ80_3AG0245370, gene-QOZ80_3BG0282680, gene-QOZ80_3BG0282690, gene-QOZ80_3BG0282700, gene-QOZ80_3BG0283150, gene-QOZ80_5AG0381590, gene-QOZ80_5BG0428580, gene-QOZ80_9AG0674680, gene-QOZ80_9AG0674690, gene-QOZ80_9AG0686080, gene-QOZ80_9AG0686160, gene-QOZ80_9AG0686170, gene-QOZ80_9BG0698510, gene-QOZ80_9BG0698530, gene-QOZ80_9BG0712240, gene-QOZ80_9BG0712330, gene-QOZ80_9BG0712340, gene-QOZ80_9BG0712350
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.1HG0016260.1, HORVU.MOREX.r3.6HG0581020.1 ... HORVU.MOREX.r3.4HG0382550.1.CDS1, HORVU.MOREX.r3.4HG0382670.1.CDS1, HORVU.MOREX.r3.4HG0383570.1.CDS1, HORVU.MOREX.r3.4HG0417510.1.CDS1, HORVU.MOREX.r3.5HG0459700.1.CDS1, HORVU.MOREX.r3.7HG0732500.1.CDS1
Poaceae	Lolium multiflorum	15	gene-QYE76_003006, gene-QYE76_003007, gene-QYE76_003129 ... gene-QYE76_022693, gene-QYE76_025267, gene-QYE76_025269, gene-QYE76_027902, gene-QYE76_027905, gene-QYE76_066641, gene-QYE76_068477, gene-QYE76_068478, gene-QYE76_068480, gene-QYE76_068579, gene-QYE76_068603, gene-QYE76_071179
Poaceae	Oryza coarctata	14	Oco03G011490, Oco03G020240, Oco04G011920, Oco04G020940 ... Oco05G011110, Oco05G011480, Oco05G011490, Oco06G011340, Oco06G014910, Oco06G014920, Oco21G006980, Oco22G008110, Oco23G001790, Oco24G001320
Poaceae	Oryza sativa	7	LOC_Os02g32750.2, LOC_Os02g49140.1, LOC_Os03g18820.1 ... LOC_Os03g19310.1, LOC_Os03g19330.1, LOC_Os11g34390.1, LOC_Os12g05380.1
Poaceae	Paspalum vaginatum	11	gene-BS78_01G379500, gene-BS78_01G379800 ... gene-BS78_01G379900, gene-BS78_01G384200, gene-BS78_04G150600, gene-BS78_04G259000, gene-BS78_05G049900, gene-BS78_05G050000, gene-BS78_05G162600, gene-BS78_05G162700, gene-BS78_05G163100
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0102551, Pt_Chr0102552, Pt_Chr0102560, Pt_Chr0102561
Poaceae	Sporobolus alterniflorus	24	Chr01G032440, Chr01G032770, Chr01G032780, Chr01G032790 ... Chr04G009180, Chr04G010650, Chr06G003390, Chr06G010670, Chr07G002530, Chr07G016400, Chr07G021310, Chr07G021320, Chr09G015300, Chr12G006780, Chr12G007140, Chr13G011230, Chr15G012200, Chr16G006030, Chr17G005450, Chr19G012080, Chr27G003880, Chr31G000970, Chr31G000980, Chr31G006440
Poaceae	Thinopyrum elongatum	10	Tel4E01G331100, Tel4E01G331400, Tel4E01G337400 ... Tel4E01G634400, Tel5E01G235000, Tel6E01G387300, Tel6E01G522500, Tel7E01G761400, Tel7E01G761700, Tel7E01G762000
Poaceae	Triticum dicoccoides	17	gene_TRIDC1BG016800, gene_TRIDC4AG016020 ... gene_TRIDC4AG017260, gene_TRIDC4BG032350, gene_TRIDC4BG032810, gene_TRIDC4BG063370, gene_TRIDC5AG022050, gene_TRIDC5AG063390, gene_TRIDC5AG078120, gene_TRIDC5BG022520, gene_TRIDC6AG029560, gene_TRIDC6AG043730, gene_TRIDC6BG010580, gene_TRIDC6BG034430, gene_TRIDC6BG051340, gene_TRIDC7AG062660, gene_TRIDC7BG056170
Poaceae	Triticum aestivum	24	TraesCS1B02G115300.1.cds1, TraesCS4A02G116100.2.cds1 ... TraesCS4A02G120100.1.cds1, TraesCS4A02G120300.1.cds1, TraesCS4B02G184600.1.cds1, TraesCS4B02G188100.1.cds1, TraesCS4B02G391200.1.cds1, TraesCS4D02G185800.1.cds1, TraesCS4D02G185900.1.cds1, TraesCS4D02G189500.1.cds1, TraesCS5A02G129800.1.cds1, TraesCS5B02G128600.1.cds1, TraesCS5D02G137300.1.cds1, TraesCS6A02G196600.1.cds1, TraesCS6B02G078800.1.cds1, TraesCS6B02G221000.1.cds1, TraesCS6B02G315100.1.cds1, TraesCS6D02G181200.1.cds1, TraesCS6D02G266700.1.cds1, TraesCS7A02G452400.1.cds1, TraesCS7B02G352300.1.cds1, TraesCS7D02G441500.1.cds1, TraesCSU02G035200.1.cds1, TraesCSU02G194500.1.cds1
Poaceae	Zea mays	21	Zm00001eb013950_P001, Zm00001eb014560_P001 ... Zm00001eb067970_P001, Zm00001eb123560_P001, Zm00001eb149410_P001, Zm00001eb185910_P001, Zm00001eb189100_P001, Zm00001eb197650_P001, Zm00001eb197690_P001, Zm00001eb242630_P001, Zm00001eb267880_P001, Zm00001eb396200_P001, Zm00001eb396240_P001, Zm00001eb396270_P001, Zm00001eb396610_P001, Zm00001eb406580_P001, Zm00001eb406590_P001, Zm00001eb406700_P001, Zm00001eb406710_P001, Zm00001eb426560_P001, Zm00001eb428150_P001
Poaceae	Zoysia japonica	13	nbis-gene-1853, nbis-gene-18902, nbis-gene-1910 ... nbis-gene-20836, nbis-gene-27054, nbis-gene-27055, nbis-gene-3526, nbis-gene-3576, nbis-gene-45721, nbis-gene-45722, nbis-gene-45727, nbis-gene-49581, nbis-gene-8874
Poaceae	Zoysia macrostachya	11	Zma_g13613, Zma_g1378, Zma_g1411, Zma_g14307, Zma_g16407 ... Zma_g18415, Zma_g18416, Zma_g18939, Zma_g18940, Zma_g18943, Zma_g3804
Portulacaceae	Portulaca oleracea	16	evm.TU.LG01.144, evm.TU.LG02.13, evm.TU.LG03.1843 ... evm.TU.LG03.215, evm.TU.LG03.821, evm.TU.LG04.610, evm.TU.LG05.70, evm.TU.LG09.1278, evm.TU.LG12.1491, evm.TU.LG12.913, evm.TU.LG13.1208, evm.TU.LG13.432, evm.TU.LG14.38, evm.TU.LG21.131, evm.TU.LG21.836, evm.TU.LG25.1262
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g07840, gene.Posoc04g07890, gene.Posoc10g03770
Rhizophoraceae	Bruguiera sexangula	6	evm.TU.Scaffold_11_RagTag.857, evm.TU.Scaffold_3_RagTag.1191 ... evm.TU.Scaffold_3_RagTag.576, evm.TU.Scaffold_4_RagTag.601, evm.TU.Scaffold_6_RagTag.1775, evm.TU.Scaffold_6_RagTag.607
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-14534, nbisL1-mrna-16085, nbisL1-mrna-17380 ... nbisL1-mrna-23930, nbisL1-mrna-28761, nbisL1-mrna-778, nbisL1-mrna-8754
Rhizophoraceae	Ceriops tagal	6	nbisL1-mrna-11266, nbisL1-mrna-15897, nbisL1-mrna-1781 ... nbisL1-mrna-20299, nbisL1-mrna-21347, nbisL1-mrna-2587
Rhizophoraceae	Ceriops zippeliana	6	nbisL1-mrna-11989, nbisL1-mrna-12447, nbisL1-mrna-1750 ... nbisL1-mrna-2445, nbisL1-mrna-499, nbisL1-mrna-6288
Rhizophoraceae	Kandelia candel	6	add.evm.TU.utg000008l.141, add.evm.TU.utg000010l.8 ... add.evm.TU.utg000011l.147, add.evm.TU.utg000011l.439, add.evm.TU.utg000019l.228, add.evm.TU.utg000019l.362
Rhizophoraceae	Kandelia obovata	2	Maker00007921, Maker00012892
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-17087, nbisL1-mrna-19244, nbisL1-mrna-22280 ... nbisL1-mrna-22608, nbisL1-mrna-22971
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-1574, nbisL1-mrna-1889, nbisL1-mrna-3310 ... nbisL1-mrna-3636, nbisL1-mrna-8513
Salicaceae	Populus euphratica	10	populus_peu07909, populus_peu07916, populus_peu08113 ... populus_peu08115, populus_peu08116, populus_peu22047, populus_peu22048, populus_peu22049, populus_peu23763, populus_peu28500
Solanaceae	Lycium barbarum	5	gene-LOC132617888, gene-LOC132621827, gene-LOC132622737 ... gene-LOC132632914, gene-LOC132644407
Solanaceae	Solanum chilense	7	SOLCI000962200, SOLCI001131000, SOLCI001752300 ... SOLCI004208400, SOLCI006422200, SOLCI006422300, SOLCI007466800
Solanaceae	Solanum pennellii	7	gene-LOC107005871, gene-LOC107008078, gene-LOC107008865 ... gene-LOC107009236, gene-LOC107013149, gene-LOC107015265, gene-LOC107019243
Tamaricaceae	Reaumuria soongarica	6	STRG.2621_chr02_+, STRG.4500_chr03_+, gene_10992, gene_1251 ... gene_2108, gene_3220
Tamaricaceae	Tamarix chinensis	5	TC03G0799, TC03G1762, TC04G1941, TC08G2362, TC12G1623
Zosteraceae	Zostera marina	4	Zosma01g01400.v3.1, Zosma01g33330.v3.1, Zosma03g23060.v3.1 ... Zosma05g21090.v3.1