Basic Information
Locus ID:
gene-LOC107015060
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 1929884 | 1934918 | + | gene-LOC107015060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 82,704.41 Da | 42.87 | 56.71 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 7.31889E-21 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 5.8E-20 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 454 | 661 | 6.8E-74 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 57 | 126 | 5.76E-23 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 64 | 185 | 2.9E-23 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 1.4E-23 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 17.466627 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 2.2E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 2.2E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 2.2E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 714 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 144 | - | - |
| Coils | Coil | Coil | 395 | 415 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_015070710.1 | uncharacterized protein LOC107015060 [Solanum pennellii] | 0 |
| Q9RUG2 | Chaperone protein DnaJ OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) OX=243230 GN=dnaJ PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology