Basic Information
Locus ID:
gene-LOC107014907
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 73340953 | 73342223 | - | gene-LOC107014907 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 39,852.02 Da | 38.45 | 70.28 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 169 | 202 | 1.5E-6 | IPR006652 |
| Pfam | PF07646 | Kelch motif | 206 | 250 | 2.1E-5 | IPR011498 |
| Pfam | PF13964 | Kelch motif | 107 | 156 | 1.9E-8 | - |
| SUPERFAMILY | SSF117281 | Kelch motif | 80 | 339 | 4.84E-43 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 47 | 1.44E-5 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 72 | 346 | 3.8E-39 | IPR015915 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 4.6E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 2.4E-6 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_015070513.1 | F-box/kelch-repeat protein At1g80440 [Solanum pennellii] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology