Basic Information
Locus ID:
gene-LOC107014531
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 71960038 | 71977785 | - | gene-LOC107014531 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 143,762.92 Da | 44.69 | 73.39 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 888 | 1176 | 2.36921E-175 | - |
| Pfam | PF00069 | Protein kinase domain | 882 | 1171 | 2.5E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 879 | 1209 | 5.26E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 880 | 1200 | 3.3E-109 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 966 | 1189 | 3.3E-109 | - |
| SMART | SM00220 | serkin_6 | 882 | 1171 | 9.0E-108 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1172 | 1276 | 10.605696 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 882 | 1171 | 52.851986 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1001 | 1013 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 682 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 725 | 749 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 688 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 112 | - | - |
| Coils | Coil | Coil | 309 | 329 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015069950.1 | probable serine/threonine protein kinase IREH1 [Solanum pennellii] | 0 |
| F4J6F6 | Probable serine/threonine protein kinase IREH1 OS=Arabidopsis thaliana OX=3702 GN=IREH1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology