Basic Information
Locus ID:
gene-LOC107014432
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 71903289 | 71906254 | + | gene-LOC107014432 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 71,877.27 Da | 34.49 | 94.54 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 380 | 642 | 4.81021E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 74 | 2.1E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 377 | 637 | 3.4E-40 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 127 | 186 | 1.1E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 647 | 3.79E-61 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 219 | 2.27E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 358 | 448 | 1.3E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 237 | 1.8E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 449 | 660 | 1.6E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 149 | 3.4E-24 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 374 | 644 | 33.361202 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 380 | 402 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_015069824.1 | probable inactive receptor kinase At1g48480 [Solanum pennellii] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology