Basic Information
Locus ID:
gene-LOC107014250
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 75083329 | 75091779 | - | gene-LOC107014250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 76,553.46 Da | 36.86 | 88.32 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 414 | 681 | 4.84813E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 114 | 173 | 8.9E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 410 | 678 | 4.0E-42 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.1E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 678 | 1.04E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 229 | 6.8E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 700 | 7.4E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 483 | 4.0E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 244 | 4.3E-44 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 408 | 681 | 35.749847 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 414 | 437 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 690 | 710 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14350.1 | STRUBBELIG-receptor family 7. | 0 |
| RefSeq | XP_015069589.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Solanum pennellii] | 0 |
| Q9LUL4 | Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology