Basic Information
Locus ID:
gene-LOC107013903
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Cysteine-rich receptor-like protein kinase 42
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 67378511 | 67381622 | - | gene-LOC107013903 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 74,515.54 Da | 42.37 | 93.32 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 333 | 595 | 2.6E-44 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 56 | 131 | 3.0E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 162 | 245 | 1.7E-8 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 316 | 621 | 4.32E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 248 | 1.2E-11 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 406 | 607 | 1.2E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 295 | 405 | 9.7E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 34 | 134 | 1.8E-13 | IPR038408 |
| SMART | SM00220 | serkin_6 | 330 | 597 | 1.8E-27 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 248 | 13.990471 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 134 | 14.16246 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 330 | 613 | 35.4813 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 336 | 359 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 451 | 463 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015069267.1 | cysteine-rich receptor-like protein kinase 1 [Solanum pennellii] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology