Basic Information
Locus ID:
gene-LOC107013864
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 75393263 | 75395798 | - | gene-LOC107013864 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 78,585.46 Da | 40.40 | 93.97 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 175 | 235 | 2.3E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 441 | 698 | 1.8E-30 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 76 | 122 | 2.0E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 99 | 267 | 5.29E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 442 | 703 | 1.08E-51 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 77 | 194 | 1.2E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 414 | 513 | 4.7E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 246 | 291 | 1.0E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 514 | 715 | 2.0E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 245 | 1.1E-9 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 438 | 705 | 27.113972 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 313 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_015069232.2 | pollen receptor-like kinase 1 [Solanum pennellii] | 0 |
| Q40902 | Pollen receptor-like kinase 1 OS=Petunia integrifolia OX=4103 GN=PRK1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology